STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FFM9Uncharacterized protein. (321 aa)    
Predicted Functional Partners:
A0A0D3GM10
Uncharacterized protein.
 
 
 0.973
A0A0D3ETG9
Acetyltransf_11 domain-containing protein.
 
  
 0.972
A0A0D3G825
FabA domain-containing protein.
    
 0.921
A0A0D3GXK7
FabA domain-containing protein.
    
 0.921
A0A0D3GXK8
FabA domain-containing protein.
    
 0.921
A0A0D3GAR6
Uncharacterized protein.
 
   
 0.769
A0A0D3HSJ0
Uncharacterized protein.
 
  
 0.763
A0A0D3EWG7
Glycos_transf_N domain-containing protein.
 
   
 0.729
A0A0D3EWG6
Glycos_transf_N domain-containing protein.
 
   
 0.727
A0A0D3EU26
Uncharacterized protein.
 
   
 0.706
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.