STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FGJ0GRAS domain-containing protein; Belongs to the GRAS family. (394 aa)    
Predicted Functional Partners:
A0A0D3GC25
Uncharacterized protein.
  
   
 0.691
A0A0D3G9G6
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.572
A0A0D3GN85
ABC2_membrane domain-containing protein.
  
   
 0.531
A0A0D3FPA0
Uncharacterized protein.
  
     0.518
A0A0D3FPA1
Uncharacterized protein.
  
     0.507
A0A0D3FNR5
PlsC domain-containing protein.
  
   
 0.499
A0A0D3H161
Uncharacterized protein.
      
 0.493
A0A0D3FFH1
Uncharacterized protein.
  
     0.478
A0A0D3FWB7
PMEI domain-containing protein.
  
     0.474
A0A0D3GRS2
Uncharacterized protein.
  
     0.474
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.