STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FGL1Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)    
Predicted Functional Partners:
A0A0D3GI85
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.907
A0A0D3F8H2
Uncharacterized protein.
   
 0.876
A0A0D3EV84
Amidohydro-rel domain-containing protein.
  
 
 0.873
A0A0D3F2M9
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.859
A0A0D3G798
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
0.833
A0A0D3FJC5
Uncharacterized protein.
  
 
 0.800
A0A0D3GR67
Uncharacterized protein.
    
  0.769
A0A0D3F012
Peroxisomal membrane protein PEX16.
   
 
 0.758
A0A0D3HEI3
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.758
A0A0D3GQI4
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.751
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.