STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FIK5DUF4005 domain-containing protein. (501 aa)    
Predicted Functional Partners:
A0A0D3ETR9
LEA_2 domain-containing protein.
  
     0.512
A0A0D3EXT6
Uncharacterized protein.
  
     0.493
A0A0D3FWB9
Uncharacterized protein.
  
     0.488
A0A0D3G6Q7
Uncharacterized protein.
  
     0.484
A0A0D3GTC5
BAH domain-containing protein.
  
     0.482
A0A0D3GBC3
LEA_2 domain-containing protein.
  
     0.477
A0A0D3FNV6
BHLH domain-containing protein.
  
     0.463
A0A0D3EWW9
F-box domain-containing protein.
  
     0.456
A0A0D3FHE5
Uncharacterized protein.
  
     0.453
A0A0D3FZR0
BHLH domain-containing protein.
  
     0.450
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.