STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FIN6CID domain-containing protein. (1486 aa)    
Predicted Functional Partners:
A0A0D3GL29
Uncharacterized protein.
    
 
 0.804
A0A0D3F0A7
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.738
A0A0D3F4P0
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.738
A0A0D3HIF3
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.738
A0A0D3HUJ8
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.738
A0A0D3F6G2
Uncharacterized protein.
  
 
 
 0.661
A0A0D3F6C0
Uncharacterized protein.
  
 
 0.581
A0A0D3GTN1
Uncharacterized protein.
  
 
   0.578
A0A0D3EKS8
Protein kinase domain-containing protein.
    
 
 0.558
A0A0D3ENT3
Protein kinase domain-containing protein.
    
 
 0.558
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.