STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FL57Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
A0A0D3EK23
LOB domain-containing protein.
  
   
 0.565
A0A0D3GZH0
Uncharacterized protein.
  
     0.536
A0A0D3GS05
Uncharacterized protein.
  
     0.531
A0A0D3FQT5
Uncharacterized protein.
  
     0.529
A0A0D3EWJ1
Uncharacterized protein.
  
     0.525
A0A0D3GHR2
Uncharacterized protein.
  
     0.524
A0A0D3EX83
LOB domain-containing protein.
  
     0.522
A0A0D3GE01
C2H2-type domain-containing protein.
  
     0.522
A0A0D3FK70
Uncharacterized protein.
  
     0.521
A0A0D3F0E9
Uncharacterized protein.
  
     0.514
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.