STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FLL8Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
A0A0D3ERT5
GRAS domain-containing protein; Belongs to the GRAS family.
    
 0.909
A0A0D3FN21
GRAS domain-containing protein; Belongs to the GRAS family.
    
 0.909
A0A0D3EMN1
BHLH domain-containing protein.
    
 0.849
A0A0D3HWF5
BHLH domain-containing protein.
    
 0.776
A0A0D3HWF3
Uncharacterized protein.
   
 0.606
A0A0D3FPT6
BHLH domain-containing protein.
   
 0.590
A0A0D3FNB9
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.579
A0A0D3FHM4
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.572
A0A0D3FB04
Uncharacterized protein.
    
 0.567
A0A0D3EQ97
Uncharacterized protein.
    
 0.556
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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