STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FLT4Uncharacterized protein. (522 aa)    
Predicted Functional Partners:
A0A0D3FFQ3
Uncharacterized protein.
  
     0.487
A0A0D3GK91
C2H2-type domain-containing protein.
  
     0.486
A0A0D3F0R4
C2H2-type domain-containing protein.
  
     0.468
A0A0D3HAG9
Uncharacterized protein.
  
     0.462
A0A0D3H763
C2H2-type domain-containing protein.
  
     0.439
A0A0D3HG21
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.
  
     0.436
A0A0D3FY11
Uncharacterized protein.
  
     0.433
A0A0D3GUK8
Uncharacterized protein.
  
     0.422
A0A0D3FQ05
Phytocyanin domain-containing protein; Belongs to the multicopper oxidase family.
  
     0.420
A0A0D3HMT7
Uncharacterized protein.
  
     0.416
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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