STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FLY8Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
A0A0D3FRT8
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.929
A0A0D3GPY9
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 0.922
A0A0D3G1I2
Amino_oxidase domain-containing protein.
     
 0.907
A0A0D3G0K0
Amino_oxidase domain-containing protein.
     
 0.901
A0A0D3FLP7
Ornithine aminotransferase.
    
 0.898
A0A0D3F603
CN hydrolase domain-containing protein.
    
 0.875
A0A0D3FPD3
Semialdhyde_dh domain-containing protein.
  
 
 0.873
A0A0D3HVU0
Uncharacterized protein.
  
 0.873
A0A0D3HFZ0
Uncharacterized protein.
  
 
 0.872
A0A0D3FBB3
Uncharacterized protein.
  
 
 0.861
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.