STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FQH1Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (185 aa)    
Predicted Functional Partners:
A0A0D3FYP5
Uncharacterized protein.
  
     0.502
A0A0D3FAP1
Uncharacterized protein.
  
     0.497
A0A0D3GSY1
Uncharacterized protein.
  
     0.489
A0A0D3GNM4
DUF632 domain-containing protein.
  
     0.488
A0A0D3GM33
Uncharacterized protein.
  
     0.486
A0A0D3F9Y0
FAS1 domain-containing protein.
  
     0.482
A0A0D3GAQ2
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.479
A0A0D3H4V7
Uncharacterized protein.
  
     0.477
A0A0D3EV69
Uncharacterized protein.
  
     0.459
A0A0D3FDX6
HMA domain-containing protein.
  
     0.452
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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