STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FQQ7CRAL-TRIO domain-containing protein. (474 aa)    
Predicted Functional Partners:
A0A0D3EY43
CRAL-TRIO domain-containing protein.
    
 
 0.570
A0A0D3FRE5
CRAL-TRIO domain-containing protein.
    
 
 0.570
A0A0D3FFJ1
CRAL-TRIO domain-containing protein.
    
 
 0.568
A0A0D3F4D9
CRAL-TRIO domain-containing protein.
      
 0.489
A0A0D3HH57
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.489
A0A0D3HH64
Uncharacterized protein.
     
 0.489
A0A0D3EYM7
CRAL-TRIO domain-containing protein.
      
 0.487
A0A0D3GJS8
Uncharacterized protein.
      
 0.477
A0A0D3G6B8
Uncharacterized protein.
      
 0.450
A0A0D3HMY2
Uncharacterized protein.
  
     0.420
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.