STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FR50Ammonium transporter. (622 aa)    
Predicted Functional Partners:
A0A0D3G2X0
Uncharacterized protein; Belongs to the P(II) protein family.
  
 0.980
A0A0D3G162
Glutamine synthetase.
  
  
 0.606
A0A0D3FFM6
Glutamine synthetase.
  
  
 0.554
A0A0D3FN75
Glutamine synthetase.
  
  
 0.554
A0A0D3FA68
Glutamine synthetase.
  
  
 0.529
A0A0D3HEC0
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
  
 0.487
A0A0D3FDJ3
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.462
A0A0D3GX43
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.462
A0A0D3EYX3
Phosphatidylserine decarboxylase proenzyme 2.
     
 0.458
A0A0D3HH22
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
 
 0.440
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.