STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FS47Jacalin-type lectin domain-containing protein. (93 aa)    
Predicted Functional Partners:
A0A0D3H4D1
Malectin_like domain-containing protein.
  
 
   0.511
A0A0D3G9S0
Uncharacterized protein.
  
     0.505
A0A0D3G356
CRM domain-containing protein.
  
 
   0.495
A0A0D3H2D8
AvrRpt-cleavage domain-containing protein.
  
 
  0.494
A0A0D3F6Y4
Uncharacterized protein.
  
     0.493
A0A0D3HKG0
Malectin_like domain-containing protein.
  
 
   0.490
A0A0D3EU29
Uncharacterized protein.
  
     0.481
A0A0D3HVE2
Uncharacterized protein.
  
    0.479
A0A0D3ESH3
HMA domain-containing protein.
  
     0.477
A0A0D3GTD3
Uncharacterized protein.
  
     0.473
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.