STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3G037Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
A0A0D3FCI0
Uncharacterized protein.
   
 0.780
A0A0D3HHU3
RRM domain-containing protein.
   
 0.780
A0A0D3HR20
RRM domain-containing protein.
   
 0.780
A0A0D3EZZ5
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 0.760
A0A0D3F7J2
Nuclear cap-binding protein subunit 2.
    
 0.753
A0A0D3F618
RRM domain-containing protein.
   
 0.742
A0A0D3FS23
Uncharacterized protein.
   
 0.742
A0A0D3EN35
Uncharacterized protein.
   
 0.738
A0A0D3FIC6
Uncharacterized protein.
   
 0.738
A0A0D3G6P1
Uncharacterized protein.
   
 0.738
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.