STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3G2Q7Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
A0A0D3G348
Serine/threonine-protein phosphatase.
    
 0.655
A0A0D3F9I6
Uncharacterized protein.
    
 0.643
A0A0D3G1D2
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.641
A0A0D3FHA6
CHCH domain-containing protein.
    
  0.602
A0A0D3F3N5
Uncharacterized protein.
   
 0.578
A0A0D3GZJ8
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.561
A0A0D3F957
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.559
A0A0D3FA15
Rhodanese domain-containing protein.
    
  0.559
A0A0D3GEZ5
Uncharacterized protein.
   
 0.557
A0A0D3FU25
L51_S25_CI-B8 domain-containing protein.
    
  0.543
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.