STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3G774Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)    
Predicted Functional Partners:
A0A0D3F0A7
Uncharacterized protein; Belongs to the cyclin family.
    
 0.788
A0A0D3F4P0
Uncharacterized protein; Belongs to the cyclin family.
    
 0.788
A0A0D3HIF3
Uncharacterized protein; Belongs to the cyclin family.
    
 0.768
A0A0D3HUJ8
Uncharacterized protein; Belongs to the cyclin family.
    
 0.768
A0A0D3G794
Protein kinase domain-containing protein.
  
 
0.741
A0A0D3GTR4
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.696
A0A0D3FNT0
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.667
A0A0D3H3K2
RPOLD domain-containing protein.
   
 0.649
A0A0D3FU76
Uncharacterized protein.
    
 0.619
A0A0D3HU34
Uncharacterized protein.
    
 0.619
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.