STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3G7F1Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (456 aa)    
Predicted Functional Partners:
A0A0D3GJW1
Uncharacterized protein.
      
 0.570
A0A0D3GTQ6
Uncharacterized protein.
   
 
 0.564
A0A0D3GGN1
Uncharacterized protein.
   
  
 0.500
A0A0D3F8S0
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.497
A0A0D3HF40
C2H2-type domain-containing protein.
      
 0.495
A0A0D3GFJ0
Usp domain-containing protein.
  
     0.478
A0A0D3GFF3
Fe2OG dioxygenase domain-containing protein.
      
 0.457
A0A0D3GSD3
Uncharacterized protein.
  
  
 0.440
A0A0D3G3E2
Uncharacterized protein.
  
     0.437
A0A0D3F7M9
Uncharacterized protein.
  
     0.434
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.