STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3G9V9Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
A0A0D3H8R0
NAC domain-containing protein.
  
     0.518
A0A0D3FMQ4
Cupin type-1 domain-containing protein.
  
     0.516
A0A0D3FX60
Uncharacterized protein.
  
     0.513
A0A0D3G7B8
Uncharacterized protein.
  
     0.512
A0A0D3G8U9
Uncharacterized protein.
  
     0.511
A0A0D3FKV9
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.509
A0A0D3HEE0
Uncharacterized protein.
  
     0.504
A0A0D3HSW0
Fn3_6 domain-containing protein.
  
     0.504
A0A0D3H797
Uncharacterized protein.
  
     0.503
A0A0D3GE45
GRAS domain-containing protein.
  
     0.501
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.