STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GBV2CbiA domain-containing protein. (306 aa)    
Predicted Functional Partners:
A0A0D3FPN0
Uncharacterized protein.
  
 
 0.796
A0A0D3F959
M20_dimer domain-containing protein.
  
 
 0.790
A0A0D3FN80
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 0.788
A0A0D3G9N2
Uncharacterized protein.
     
 0.777
A0A0D3FP28
Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.
   
 0.774
A0A0D3GT98
Uncharacterized protein.
     
 0.767
A0A0D3GR12
CN hydrolase domain-containing protein.
     
 0.751
A0A0D3GU79
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
     
 0.744
A0A0D3GC99
Uncharacterized protein.
    
 0.742
A0A0D3ELF3
Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.735
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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