STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GFQ2Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
A0A0D3EWC8
Uncharacterized protein.
    
 0.654
A0A0D3G8D1
Uncharacterized protein.
    
 0.654
A0A0D3GU79
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
  0.652
A0A0D3FN80
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 0.637
A0A0D3HPL9
Uncharacterized protein.
    
 0.637
A0A0D3HVK1
Uncharacterized protein.
    
 0.637
A0A0D3EJG6
FAD_binding_3 domain-containing protein.
   
 
 0.583
A0A0D3F535
FAD_binding_3 domain-containing protein.
   
 
 0.583
A0A0D3F6G6
FAD_binding_3 domain-containing protein.
   
 
 0.583
A0A0D3FDY7
Uncharacterized protein.
   
 
 0.583
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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