STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GPP4AAI domain-containing protein. (104 aa)    
Predicted Functional Partners:
A0A0D3HVW8
Uncharacterized protein.
  
     0.511
A0A0D3FIL8
Uncharacterized protein.
  
     0.506
A0A0D3G2S1
Uncharacterized protein.
  
     0.492
A0A0D3G8K8
Uncharacterized protein.
  
     0.484
A0A0D3FTQ6
Uncharacterized protein.
  
     0.480
A0A0D3HQ85
Uncharacterized protein.
  
     0.475
A0A0D3FH51
Uncharacterized protein.
  
     0.471
A0A0D3FMC8
Uncharacterized protein.
  
     0.465
A0A0D3HX44
Uncharacterized protein.
  
     0.452
A0A0D3G3X1
Uncharacterized protein.
  
     0.448
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.