STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GU33Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
A0A0D3FBS7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.840
A0A0D3FZH8
Uncharacterized protein.
    
 0.840
A0A0D3GKZ8
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.836
A0A0D3F7Y9
Uncharacterized protein.
   
 0.820
A0A0D3FCD6
RPA_C domain-containing protein.
   
 0.820
A0A0D3GK86
Uncharacterized protein.
   
 0.820
A0A0D3FBM1
DNA helicase; Belongs to the MCM family.
   
 0.802
A0A0D3EKA1
DUF1767 domain-containing protein.
    
 0.781
A0A0D3EPW9
DNA helicase; Belongs to the MCM family.
   
 0.770
A0A0D3FG25
Uncharacterized protein.
   
 0.761
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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