STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GV11Uncharacterized protein; Belongs to the cytochrome P450 family. (500 aa)    
Predicted Functional Partners:
A0A0D3FVJ2
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
  0.856
A0A0D3FB03
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.833
A0A0D3H179
Uncharacterized protein.
    
 0.833
A0A0D3H181
Uncharacterized protein.
    
 0.833
A0A0D3EXG8
Uncharacterized protein.
    
 0.820
A0A0D3FU26
Uncharacterized protein.
    
 0.820
A0A0D3F999
Uncharacterized protein.
    
 0.802
A0A0D3FUR5
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.778
A0A0D3HT15
Hydrolase_4 domain-containing protein.
     
 0.768
A0A0D3GRG6
Thioredoxin domain-containing protein.
    
 0.765
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.