STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GVU1Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
A0A0D3FM79
WD_REPEATS_REGION domain-containing protein.
    
  0.658
A0A0D3EK27
DUF1421 domain-containing protein.
    
 0.652
A0A0D3F4J2
HAUS6_N domain-containing protein.
    
 0.640
A0A0D3FCU7
Uncharacterized protein.
   
 0.622
A0A0D3FBA8
Uncharacterized protein.
    
 0.612
A0A0D3FBB7
Uncharacterized protein.
    
 0.612
A0A0D3F3Q9
Uncharacterized protein.
    
 0.604
A0A0D3F3R0
Uncharacterized protein.
    
 0.604
A0A0D3F3R1
Uncharacterized protein.
    
 0.604
A0A0D3HDQ9
Uncharacterized protein.
    
 0.604
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.