STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GXC8F-box domain-containing protein. (299 aa)    
Predicted Functional Partners:
A0A0D3FDW8
Uncharacterized protein.
    
 0.889
A0A0D3GQX3
Uncharacterized protein.
    
 0.807
A0A0D3GEZ5
Uncharacterized protein.
    
 0.801
A0A0D3FE51
Histone H2A; Belongs to the histone H2A family.
   
 0.794
A0A0D3FNX5
Uncharacterized protein; Belongs to the histone H2A family.
   
 0.794
A0A0D3FM46
Uncharacterized protein.
    
 0.791
A0A0D3GWI1
Uncharacterized protein.
    
 0.786
A0A0D3EN93
Ubiquitin-like domain-containing protein.
   
 0.775
A0A0D3F9I6
Uncharacterized protein.
    
 0.756
A0A0D3H3K2
RPOLD domain-containing protein.
    
 0.754
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.