STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3GZ69BSD domain-containing protein. (542 aa)    
Predicted Functional Partners:
A0A0D3F038
Uncharacterized protein.
    
 0.999
A0A0D3FXT2
VWFA domain-containing protein.
    
 0.999
A0A0D3G350
Helicase ATP-binding domain-containing protein.
    
 0.999
A0A0D3G1S8
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.996
A0A0D3FNT0
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.994
A0A0D3G794
Protein kinase domain-containing protein.
   
 0.994
A0A0D3H6Z7
Uncharacterized protein.
    
 0.994
A0A0D3HGI3
Uncharacterized protein.
    
 0.994
A0A0D3H0F5
BHD_3 domain-containing protein.
    
 0.992
A0A0D3EZT9
RPOL4c domain-containing protein.
    
 0.991
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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