STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3H0N3ZF-HD dimerization-type domain-containing protein. (129 aa)    
Predicted Functional Partners:
A0A0D3H4Z0
Uncharacterized protein.
    
 
 0.498
A0A0D3FIF9
Tub domain-containing protein; Belongs to the TUB family.
  
     0.494
A0A0D3FC67
LOB domain-containing protein.
  
     0.486
A0A0D3FH46
LOB domain-containing protein.
  
     0.474
A0A0D3FM12
LOB domain-containing protein.
  
     0.474
A0A0D3H3A5
LOB domain-containing protein.
  
     0.470
A0A0D3GWI4
Uncharacterized protein.
  
     0.467
A0A0D3G2F1
Uncharacterized protein.
  
     0.466
A0A0D3HNH4
Uncharacterized protein.
  
     0.466
A0A0D3GWN6
Uncharacterized protein.
  
     0.463
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.