STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3H3W3SWIB domain-containing protein. (102 aa)    
Predicted Functional Partners:
A0A0D3F9W2
Uncharacterized protein.
   
 0.869
A0A0D3FP73
J domain-containing protein.
   
 0.869
A0A0D3GTE7
BAF250_C domain-containing protein.
    
 0.862
A0A0D3H9K9
Uncharacterized protein.
    
 
 0.745
A0A0D3F1X6
Uncharacterized protein.
    
 0.708
A0A0D3FFZ5
Uncharacterized protein.
    
 0.708
A0A0D3FND6
Uncharacterized protein.
    
 0.708
A0A0D3FRX1
Uncharacterized protein.
    
 0.708
A0A0D3FX40
Uncharacterized protein.
    
 0.708
A0A0D3HIZ5
Uncharacterized protein.
    
 0.708
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.