STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3H492Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
A0A0D3FBS7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.698
A0A0D3FZH8
Uncharacterized protein.
    
 
 0.628
A0A0D3FPC4
Uncharacterized protein.
    
 
 0.617
A0A0D3HSW8
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 
 0.550
A0A0D3ESL1
Uncharacterized protein.
   
 
 0.544
A0A0D3GAJ6
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
 0.544
A0A0D3GN34
SAP domain-containing protein.
    
 
 0.541
A0A0D3GR58
Uncharacterized protein.
  
 
 0.533
A0A0D3HWW6
Uncharacterized protein.
  
 
 0.533
A0A0D3G4F7
Uncharacterized protein.
    
 
 0.517
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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