STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3H5A6DYW_deaminase domain-containing protein. (902 aa)    
Predicted Functional Partners:
A0A0D3GHM8
Uncharacterized protein.
  
 
   0.491
A0A0D3F9P1
Uncharacterized protein.
  
 
  0.462
A0A0D3FG70
Uncharacterized protein.
  
     0.459
A0A0D3G1Z8
Uncharacterized protein.
  
     0.449
A0A0D3ETP6
BURP domain-containing protein.
  
 
   0.443
A0A0D3G9I5
Uncharacterized protein.
      
 0.441
A0A0D3FPR4
Uncharacterized protein.
  
     0.439
A0A0D3F7G7
Uncharacterized protein.
  
     0.438
A0A0D3G3G1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.438
A0A0D3FZ18
Uncharacterized protein.
    
 0.434
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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