STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3H7Q8Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
A0A0D3G8E0
Uncharacterized protein.
  
     0.537
A0A0D3EWC0
Uncharacterized protein.
  
     0.535
A0A0D3F9C0
PWWP domain-containing protein.
  
     0.531
A0A0D3G2P5
Uncharacterized protein.
  
     0.528
A0A0D3FK85
Uncharacterized protein.
  
     0.525
A0A0D3HUX2
Uncharacterized protein.
  
     0.518
A0A0D3FX09
Uncharacterized protein.
  
     0.515
A0A0D3H820
Uncharacterized protein.
  
     0.515
A0A0D3FVP0
Uncharacterized protein.
  
     0.513
A0A0D3GTM6
Uncharacterized protein.
  
     0.513
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.