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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HAS8NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family. (1376 aa)    
Predicted Functional Partners:
A0A0D3FBN3
Shugoshin_C domain-containing protein.
  
 
   0.498
A0A0D3HQB6
Uncharacterized protein.
  
    0.495
A0A0D3HKK1
Uncharacterized protein.
  
     0.483
A0A0D3H4Y4
Uncharacterized protein.
  
 
   0.474
A0A0D3GVV3
Uncharacterized protein.
  
     0.471
A0A0D3GAY0
Uncharacterized protein.
  
     0.460
A0A0D3FH13
Uncharacterized protein.
  
    0.457
A0A0D3H8S9
Uncharacterized protein.
  
     0.457
A0A0D3EKK0
Protein kinase domain-containing protein.
   
  0.449
A0A0D3FPG3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  0.449
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.