STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HB61Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
A0A0D3EZF7
C2H2-type domain-containing protein.
  
     0.537
A0A0D3GCR9
Neprosin domain-containing protein.
  
     0.535
A0A0D3H0J3
TCP domain-containing protein.
  
     0.535
A0A0D3H0K1
NAC domain-containing protein.
  
     0.532
A0A0D3G227
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.530
A0A0D3G232
NAC domain-containing protein.
  
     0.525
A0A0D3H3N1
MADS-box domain-containing protein.
  
     0.524
A0A0D3GH74
Uncharacterized protein.
  
     0.523
A0A0D3HSX6
Uncharacterized protein.
  
     0.513
A0A0D3FCS9
NAC domain-containing protein.
  
     0.512
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (14%) [HD]