Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0D3F1R2 | A0A0D3HG21 | PKS_ER domain-containing protein. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. | 0.581 |
A0A0D3F3V7 | A0A0D3F562 | EF-hand domain-containing protein. | Uncharacterized protein. | 0.539 |
A0A0D3F3V7 | A0A0D3FQ05 | EF-hand domain-containing protein. | Phytocyanin domain-containing protein; Belongs to the multicopper oxidase family. | 0.583 |
A0A0D3F3V7 | A0A0D3FR52 | EF-hand domain-containing protein. | C2H2-type domain-containing protein. | 0.598 |
A0A0D3F3V7 | A0A0D3GBB5 | EF-hand domain-containing protein. | Uncharacterized protein. | 0.703 |
A0A0D3F3V7 | A0A0D3GU68 | EF-hand domain-containing protein. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.605 |
A0A0D3F3V7 | A0A0D3H011 | EF-hand domain-containing protein. | PLD_C domain-containing protein. | 0.542 |
A0A0D3F3V7 | A0A0D3H6L8 | EF-hand domain-containing protein. | Uncharacterized protein. | 0.649 |
A0A0D3F3V7 | A0A0D3HDK1 | EF-hand domain-containing protein. | Protein kinase domain-containing protein. | 0.618 |
A0A0D3F3V7 | A0A0D3HG21 | EF-hand domain-containing protein. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. | 0.644 |
A0A0D3F562 | A0A0D3F3V7 | Uncharacterized protein. | EF-hand domain-containing protein. | 0.539 |
A0A0D3F562 | A0A0D3FQ05 | Uncharacterized protein. | Phytocyanin domain-containing protein; Belongs to the multicopper oxidase family. | 0.585 |
A0A0D3F562 | A0A0D3FR52 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.614 |
A0A0D3F562 | A0A0D3GBB5 | Uncharacterized protein. | Uncharacterized protein. | 0.721 |
A0A0D3F562 | A0A0D3GU68 | Uncharacterized protein. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.610 |
A0A0D3F562 | A0A0D3H011 | Uncharacterized protein. | PLD_C domain-containing protein. | 0.553 |
A0A0D3F562 | A0A0D3H6L8 | Uncharacterized protein. | Uncharacterized protein. | 0.646 |
A0A0D3F562 | A0A0D3HDK1 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.590 |
A0A0D3F562 | A0A0D3HG21 | Uncharacterized protein. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. | 0.618 |
A0A0D3FQ05 | A0A0D3F3V7 | Phytocyanin domain-containing protein; Belongs to the multicopper oxidase family. | EF-hand domain-containing protein. | 0.583 |
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