STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HG21Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. (249 aa)    
Predicted Functional Partners:
A0A0D3FQ05
Phytocyanin domain-containing protein; Belongs to the multicopper oxidase family.
  
 
  0.646
A0A0D3F3V7
EF-hand domain-containing protein.
  
 
  0.644
A0A0D3H6L8
Uncharacterized protein.
  
 
  0.639
A0A0D3HDK1
Protein kinase domain-containing protein.
  
 
  0.619
A0A0D3F562
Uncharacterized protein.
  
 
  0.618
A0A0D3FR52
C2H2-type domain-containing protein.
  
 
  0.599
A0A0D3GBB5
Uncharacterized protein.
  
  0.591
A0A0D3H011
PLD_C domain-containing protein.
  
  
  0.589
A0A0D3GU68
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
   0.586
A0A0D3F1R2
PKS_ER domain-containing protein.
    
  0.581
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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