STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HGL1Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
A0A0D3H064
Uncharacterized protein.
  
     0.480
A0A0D3FRJ5
Uncharacterized protein.
  
     0.465
A0A0D3FMP6
Uncharacterized protein.
  
     0.462
A0A0D3FD71
Uncharacterized protein.
  
     0.457
A0A0D3HJQ7
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.428
A0A0D3H648
Uncharacterized protein.
  
     0.427
A0A0D3F5F1
AP2/ERF domain-containing protein.
  
     0.417
A0A0D3FGR5
Uncharacterized protein.
  
     0.413
A0A0D3FD93
OVATE domain-containing protein.
  
     0.412
A0A0D3GWI6
NAC domain-containing protein.
  
     0.411
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (16%) [HD]