STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HKS7Fn3_like domain-containing protein. (770 aa)    
Predicted Functional Partners:
A0A0D3HK54
Uncharacterized protein.
    
 0.711
A0A0D3ERE1
Uncharacterized protein.
    
 0.704
A0A0D3EK53
Uncharacterized protein.
    
 0.702
A0A0D3EPZ9
Uncharacterized protein.
    
  0.702
A0A0D3EX94
Uncharacterized protein.
    
  0.702
A0A0D3HK53
Uncharacterized protein.
    
  0.700
A0A0D3HBM3
Ipi1_N domain-containing protein.
    
 0.568
A0A0D3HQ54
Fn3_like domain-containing protein.
  
  
 
0.562
A0A0D3EMU8
Fn3_like domain-containing protein.
  
  
 
0.558
A0A0D3FMU2
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
 
 
 0.517
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.