STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HMG1Alpha-mannosidase. (983 aa)    
Predicted Functional Partners:
A0A0D3HB24
Alpha-mannosidase.
  
  
 
0.936
A0A0D3GEU2
Alpha-mannosidase.
  
  
0.878
A0A0D3FCH8
Uncharacterized protein.
   
 
 0.875
A0A0D3EPK5
Alpha-galactosidase.
   
 
 0.605
A0A0D3G787
Uncharacterized protein.
   
 
 0.551
A0A0D3EYR7
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
   
 
 0.540
A0A0D3GUZ2
Alpha-galactosidase.
   
 
 0.507
A0A0D3GQI7
Alpha-galactosidase.
   
 
 0.484
A0A0D3HF26
Alpha-galactosidase.
   
 
 0.484
A0A0D3HF29
Alpha-galactosidase.
   
 
 0.484
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.