STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HNB9F-box domain-containing protein. (410 aa)    
Predicted Functional Partners:
A0A0D3GSL7
Uncharacterized protein.
  
 
 0.721
A0A0D3FGN4
Uncharacterized protein.
  
 
  0.644
A0A0D3F523
Uncharacterized protein.
    
 
 0.643
A0A0D3H9K9
Uncharacterized protein.
    
 
 0.643
A0A0D3FI44
Uncharacterized protein.
  
 
  0.640
A0A0D3HPD8
Protein kinase domain-containing protein.
    
 0.605
A0A0D3FC93
Uncharacterized protein.
  
 
  0.601
A0A0D3GXR9
DUF4220 domain-containing protein.
  
 
  0.601
A0A0D3HDT4
NAB domain-containing protein.
  
 
  0.598
A0A0D3H889
HECT domain-containing protein.
  
 
 0.594
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.