STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HQC7RRM domain-containing protein. (228 aa)    
Predicted Functional Partners:
A0A0D3EXV7
Uncharacterized protein.
   
 0.990
A0A0D3EQ05
Uncharacterized protein.
   
 0.985
A0A0D3EQ06
Uncharacterized protein.
   
 0.985
A0A0D3H0F8
FoP_duplication domain-containing protein.
    
 
0.984
A0A0D3FAX3
Uncharacterized protein.
   
 0.979
A0A0D3FCU0
Uncharacterized protein.
    
 0.974
A0A0D3H4W5
WD_REPEATS_REGION domain-containing protein.
   
 0.970
A0A0D3EZZ5
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 
 0.950
A0A0D3F7J2
Nuclear cap-binding protein subunit 2.
   
 0.938
A0A0D3FIE9
MIF4G domain-containing protein.
    
 0.937
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.