STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HQZ6LEA_2 domain-containing protein. (275 aa)    
Predicted Functional Partners:
A0A0D3HGM4
Uncharacterized protein.
  
     0.510
A0A0D3G7J6
UBA domain-containing protein.
  
     0.496
A0A0D3ELM1
Uncharacterized protein.
  
     0.492
A0A0D3F965
Uncharacterized protein.
  
     0.487
A0A0D3GWE5
Uncharacterized protein.
  
     0.484
A0A0D3HJ69
Uncharacterized protein.
  
     0.467
A0A0D3HGK5
Uncharacterized protein.
  
     0.466
A0A0D3F7Q3
Uncharacterized protein.
  
     0.461
A0A0D3EN34
Uncharacterized protein.
  
     0.460
A0A0D3ERN9
Uncharacterized protein.
  
     0.459
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.