STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HSS2Protein kinase domain-containing protein. (475 aa)    
Predicted Functional Partners:
A0A0D3HRZ6
Uncharacterized protein.
   
 
 0.851
A0A0D3FE84
Alba domain-containing protein.
   
 
 0.531
A0A0D3FNR3
Alba domain-containing protein.
   
 
 0.531
A0A0D3FTA0
Thioredoxin-like_fold domain-containing protein.
   
 
 0.531
A0A0D3FVX5
Alba domain-containing protein.
   
 
 0.531
A0A0D3H9J1
Thioredoxin-like_fold domain-containing protein.
   
 
 0.531
A0A0D3HIP4
Alba domain-containing protein.
   
 
 0.531
A0A0D3FI34
Uncharacterized protein.
   
   0.507
A0A0D3FLC4
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.441
A0A0D3GBB7
Uncharacterized protein.
     
 0.421
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.