Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A0D3HVJ5Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (935 aa)    
Predicted Functional Partners:
A0A0D3EKK0
Protein kinase domain-containing protein.
   
  0.442
A0A0D3FPG3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  0.442
A0A0D3G1N1
RING-type domain-containing protein.
   
  0.402
A0A0D3G321
RING-type domain-containing protein.
   
  0.402
A0A0D3H649
RING-type domain-containing protein.
   
  0.402
A0A0D3HGQ6
Uncharacterized protein.
   
  0.402
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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