STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HW12Uncharacterized protein. (1026 aa)    
Predicted Functional Partners:
A0A0D3GTT6
Uncharacterized protein.
   
 0.667
A0A0D3F7J2
Nuclear cap-binding protein subunit 2.
    
  0.658
A0A0D3G037
Uncharacterized protein.
   
 0.639
A0A0D3FIE9
MIF4G domain-containing protein.
   
 0.602
A0A0D3FCI0
Uncharacterized protein.
   
 0.598
A0A0D3HHU3
RRM domain-containing protein.
   
 0.598
A0A0D3HR20
RRM domain-containing protein.
   
 0.598
A0A0D3H3K2
RPOLD domain-containing protein.
    
 0.562
A0A0D3FJB8
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.550
A0A0D3GTQ1
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.550
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (16%) [HD]