STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3HW54Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
A0A0D3EK44
Uncharacterized protein.
    
 0.976
A0A0D3FZI7
Uncharacterized protein.
   
0.950
A0A0D3FQU1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 0.859
A0A0D3FJX8
PHB domain-containing protein.
   
    0.858
A0A0D3FQR4
Glyco_trans_2-like domain-containing protein.
  
 0.858
A0A0D3G1V5
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
   
 0.844
A0A0D3F501
Glyco_tran_28_C domain-containing protein.
    
 0.827
A0A0D3GGP0
Uncharacterized protein.
  
 
 0.813
A0A0D3GQG9
Uncharacterized protein.
  
 
 0.813
A0A0D3F5W2
Uncharacterized protein.
   
 0.801
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (12%) [HD]