STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718005_01021Unannotated protein. (267 aa)    
Predicted Functional Partners:
GCA_000718005_01020
Unannotated protein.
     0.792
GCA_000718005_04172
Unannotated protein.
  
   
 0.558
GCA_000718005_04170
Unannotated protein.
  
     0.507
GCA_000718005_04866
Unannotated protein.
  
     0.463
Your Current Organism:
Actinoalloteichus cyanogriseus
NCBI taxonomy Id: 65497
Other names: A. cyanogriseus, ATCC 27421 [[Streptomyces caeruleus]], Actinoalloteichus cyanogriseus Tamura et al. 2000, Actinomyces caeruleus, BCRC 13659 [[Streptomyces caeruleus]], CBS 645.72 [[Streptomyces caeruleus]], CCRC 13659 [[Streptomyces caeruleus]], CCRC:13659 [[Streptomyces caeruleus]], CIP 106755, DSM 40103 [[Streptomyces caeruleus]], DSM 43889, IFO 13344 [[Streptomyces caeruleus]], IFO 14455, IMET 40622 [[Streptomyces caeruleus]], IPV 930 [[Streptomyces caeruleus]], ISP 5103 [[Streptomyces caeruleus]], JCM 4014 [[Streptomyces caeruleus]], JCM 4730 [[Streptomyces caeruleus]], JCM 6095, NBRC 13344 [[Streptomyces caeruleus]], NBRC 14455, NRRL B-16252, NRRL B-2194 [[Streptomyces caeruleus]], NRRL-ISP 5103 [[Streptomyces caeruleus]], RIA 755 [[Streptomyces caeruleus]], Streptomyces caeruleus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.