STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP75992.1Hypothetical protein. (1044 aa)    
Predicted Functional Partners:
SER46025.1
Chromosome segregation protein Spo0J, contains ParB-like nuclease domain.
    
 
 0.781
SES42633.1
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
    
 
 0.781
SER44989.1
Hypothetical protein.
  
     0.769
SEQ34861.1
Hypothetical protein.
  
     0.766
SEQ83777.1
Hypothetical protein.
  
     0.760
SES22238.1
AAA domain-containing protein.
  
     0.758
SES23425.1
Hypothetical protein.
  
     0.738
SES23913.1
Hypothetical protein.
  
     0.733
SES35743.1
V/A-type H+-transporting ATPase subunit G/H.
  
     0.732
SER84497.1
Hypothetical protein.
  
     0.728
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.