STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP84371.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (403 aa)    
Predicted Functional Partners:
SEP84344.1
Multiple sugar transport system substrate-binding protein.
 
    0.867
SEP84201.1
BadF-type ATPase.
 
     0.862
SEP84239.1
6-phospho-beta-glucosidase.
 
  
  0.842
SEP84316.1
Multiple sugar transport system permease protein.
 
     0.805
SEQ37801.1
PTS system, N-acetylglucosamine-specific IIB component.
  
 0.778
SEQ37854.1
PTS system, N-acetylglucosamine-specific IIC component.
  
 0.778
SEP84283.1
Multiple sugar transport system permease protein.
 
   
 0.772
SER35441.1
Glucokinase.
  
     0.772
SER33299.1
Glucokinase.
  
     0.769
SER61959.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.765
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.