STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP90607.1Uncharacterized conserved protein YtfP, gamma-glutamylcyclotransferase (GGCT)/AIG2-like family. (314 aa)    
Predicted Functional Partners:
SEP90414.1
FtsK/SpoIIIE family protein.
 
     0.763
SEQ74501.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.761
SEP72838.1
Protein of unknown function.
  
     0.724
SES24109.1
Acetyltransferase (GNAT) family protein.
  
     0.710
SEP82821.1
2'-5' RNA ligase superfamily protein.
  
     0.709
SES28782.1
Protein of unknown function.
  
     0.695
SEP90576.1
Protein of unknown function.
 
     0.691
SEQ75787.1
Nuclease-related domain-containing protein.
  
     0.688
SEQ03766.1
TIGR02678 family protein.
  
     0.684
SES11872.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.