Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP92966.1 | SEP92978.1 | SAMN04488000_101702 | SAMN04488000_101703 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.623 |
SEP92966.1 | SEP93007.1 | SAMN04488000_101702 | SAMN04488000_101704 | Transcriptional regulator, TetR family. | Cupin domain-containing protein. | 0.439 |
SEP92978.1 | SEP92966.1 | SAMN04488000_101703 | SAMN04488000_101702 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.623 |
SEP92978.1 | SEP93007.1 | SAMN04488000_101703 | SAMN04488000_101704 | Hypothetical protein. | Cupin domain-containing protein. | 0.533 |
SEP93007.1 | SEP92966.1 | SAMN04488000_101704 | SAMN04488000_101702 | Cupin domain-containing protein. | Transcriptional regulator, TetR family. | 0.439 |
SEP93007.1 | SEP92978.1 | SAMN04488000_101704 | SAMN04488000_101703 | Cupin domain-containing protein. | Hypothetical protein. | 0.533 |
SEP93007.1 | SEP93039.1 | SAMN04488000_101704 | SAMN04488000_101705 | Cupin domain-containing protein. | Hypothetical protein. | 0.421 |
SEP93007.1 | SEQ99926.1 | SAMN04488000_101704 | SAMN04488000_105386 | Cupin domain-containing protein. | 3-oxoadipate enol-lactonase. | 0.499 |
SEP93007.1 | SER58244.1 | SAMN04488000_101704 | SAMN04488000_110108 | Cupin domain-containing protein. | 4-carboxymuconolactone decarboxylase. | 0.499 |
SEP93039.1 | SEP93007.1 | SAMN04488000_101705 | SAMN04488000_101704 | Hypothetical protein. | Cupin domain-containing protein. | 0.421 |
SEQ99926.1 | SEP93007.1 | SAMN04488000_105386 | SAMN04488000_101704 | 3-oxoadipate enol-lactonase. | Cupin domain-containing protein. | 0.499 |
SEQ99926.1 | SER58244.1 | SAMN04488000_105386 | SAMN04488000_110108 | 3-oxoadipate enol-lactonase. | 4-carboxymuconolactone decarboxylase. | 0.974 |
SER58244.1 | SEP93007.1 | SAMN04488000_110108 | SAMN04488000_101704 | 4-carboxymuconolactone decarboxylase. | Cupin domain-containing protein. | 0.499 |
SER58244.1 | SEQ99926.1 | SAMN04488000_110108 | SAMN04488000_105386 | 4-carboxymuconolactone decarboxylase. | 3-oxoadipate enol-lactonase. | 0.974 |