STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ27262.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein. (157 aa)    
Predicted Functional Partners:
SEQ24064.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.959
SEP95290.1
Oligopeptide transport system permease protein.
 
  0.954
SEP95329.1
Oligopeptide transport system permease protein.
 
  0.925
SEP99316.1
Peptide/nickel transport system permease protein.
 
  0.925
SEQ24036.1
Peptide/nickel transport system permease protein.
 
  0.925
SER46312.1
Peptide/nickel transport system permease protein.
 
  0.925
SES36739.1
Peptide/nickel transport system permease protein.
 
 
  0.925
SEP77838.1
Peptide/nickel transport system permease protein.
 
  0.924
SER61881.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.891
SEP95259.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.887
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.